miRBase entry: bta-mir-211

Stem-loop bta-mir-211


Accession
MI0009775
Description
Bos taurus bta-mir-211 precursor miRNA
Gene family
MIPF0000042; mir-204

Literature search
4 open access papers mention bta-mir-211
(22 sentences)

Sequence

2130 reads, 29 reads per million, 62 experiments
uccccuggcugugugaccugugggcUUCCCUUUGUCAUCCUUUGCCcaggguucugaguggggcagggacagcaaaggggugcucagucgucaccucccacagcauggag
...((..((((((((((...(((((.(((((((((..(((((.((((.............)))))))))..))))))))).)))))...))))).....)))))..))..

Structure
ucc  ug     -----     cug     U         CA     U    agggu 
   cc  gcugu     gugac   ugggc UCCCUUUGU  UCCUU GCCc     u
   ||  |||||     |||||   ||||| |||||||||  ||||| ||||     c
   gg  cgaca     cacug   acucg ggggaaacg  aggga cggg     u
-ga  ua     cccuc     cug     u         ac     -    gugag 


Annotation confidence Not enough data
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Genome context
chr21: 28130528-28130637 [-]

Database links

Mature bta-miR-211

Accession MIMAT0009263
Description Bos taurus bta-miR-211 mature miRNA
Sequence 26 - UUCCCUUUGUCAUCCUUUGCC - 46
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39

  2. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125