miRBase entry: bta-mir-302b

Stem-loop bta-mir-302b


Accession
MI0009793
Description
Bos taurus bta-mir-302b precursor miRNA
Gene family
MIPF0000071; mir-302

Literature search
6 open access papers mention bta-mir-302b
(93 sentences)

Sequence

4 reads, 1 reads per million, 3 experiments
cucccuuuaacuuuaacaugguaguacuuucugugacuuuugaaauagUAAGUGCUUCCAUGUUUUAGUAGaagu
....((((.(((..(((((((.(((((((.((((..(....)..)))).))))))).)))))))..))).)))).

Structure
cucc    a   uu       u       u    ga u 
    cuuu acu  aacaugg aguacuu cugu  c u
    |||| |||  ||||||| ||||||| ||||  |  
    gaaG UGA  UUGUACC UCGUGAA gaua  g u
---u    A   UU       U       U    aa u 


Annotation confidence Not enough data
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Genome context
chr6: 14305231-14305305 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from bta-mir-302b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-302b

Accession MIMAT0009280
Description Bos taurus bta-miR-302b mature miRNA
Sequence 49 - UAAGUGCUUCCAUGUUUUAGUAG - 71
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39

  2. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125