miRBase entry: bta-mir-328

Stem-loop bta-mir-328


Accession
MI0009800
Description
Bos taurus bta-mir-328 precursor miRNA
Gene family
MIPF0000203; mir-328

Literature search
2 open access papers mention bta-mir-328
(4 sentences)

Sequence

475 reads, 23 reads per million, 67 experiments
cuguuucggagccuggagcgggggggcaggaggggcucagggagauagugugugcugcccCUGGCCCUCUCUGCCCUUCCGUccccuguucc
.......(((((..((.(((((((((((((.(((((.(((((.(.((((....))))))))))))))).))))))))))))).))..)))))

Structure
cuguuuc     cu  a             a     u     a a    g 
       ggagc  gg gcgggggggcagg ggggc caggg g uagu u
       |||||  || ||||||||||||| ||||| ||||| | ||||  
       ccuug  cc UGCCUUCCCGUCU UCCCG GUCcc c gucg g
-------     uc  c             C     -     - -    u 


Annotation confidence Not enough data
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Genome context
chr18: 35062240-35062331 [-]

Database links

Mature bta-miR-328

Accession MIMAT0009287
Description Bos taurus bta-miR-328 mature miRNA
Sequence 61 - CUGGCCCUCUCUGCCCUUCCGU - 82
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39

  2. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125