miRBase entry: bta-mir-329a

Stem-loop bta-mir-329a


Accession
MI0009801
Description
Bos taurus bta-mir-329a precursor miRNA
Gene family
MIPF0000110; mir-329

Literature search
3 open access papers mention bta-mir-329a
(3 sentences)

Sequence

37 reads, 9 reads per million, 26 experiments
gugguacuugaggagagguuuucuaggucucuguuucuuucaugaggaugaAACACACCUGGUUAACCUUUUUuccaguauca
.(((((((.(((((((((((..((((((...((((((.(((....))).)))))).))))))..))))))))))).)))))))

Structure
g       u           uu      cuc      u   a 
 ugguacu gaggagagguu  cuaggu   uguuuc uuc u
 ||||||| |||||||||||  ||||||   |||||| |||  
 acuauga cuUUUUUCCAA  GGUCCA   ACAAag agg g
-       c           UU      --C      u   a 


Annotation confidence Not enough data
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Genome context
chr21: 67845190-67845272 [+]
Clustered miRNAs
15 other miRNAs are < 10 kb from bta-mir-329a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-329a

Accession MIMAT0009288
Description Bos taurus bta-miR-329a mature miRNA
Sequence 52 - AACACACCUGGUUAACCUUUUU - 73
Evidence not_experimental

References

  1. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125