miRBase entry: bta-mir-33a

Stem-loop bta-mir-33a


Accession
MI0009807
Description
Bos taurus bta-mir-33a precursor miRNA
Gene family
MIPF0000070; mir-33

Literature search
17 open access papers mention bta-mir-33a
(62 sentences)

Sequence

2749 reads, 65 reads per million, 72 experiments
cugcgGUGCAUUGUAGUUGCAUUGCAuguucuggcgguacccgugcaauguuuccacagugcaucacag
(((.((((((((((.(..((((((((((....((.....))))))))))))..).)))))))))).)))

Structure
   c          A UU          uucu  c 
cug gGUGCAUUGU G  GCAUUGCAug    gg g
||| |||||||||| |  ||||||||||    || g
gac cuacgugaca c  uguaacgugc    cc u
   a          c uu          ----  a 


Annotation confidence High
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Genome context
chr5: 113746881-113746949 [+]

Database links

Mature bta-miR-33a

Accession MIMAT0009294
Description Bos taurus bta-miR-33a mature miRNA
Sequence 6 - GUGCAUUGUAGUUGCAUUGCA - 26
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39

  2. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125