miRBase entry: bta-mir-412

Stem-loop bta-mir-412


Accession
MI0009827
Description
Bos taurus bta-mir-412 precursor miRNA
Gene family
MIPF0000192; mir-412

Literature search
2 open access papers mention bta-mir-412
(2 sentences)

Sequence

877 reads, 19 reads per million, 63 experiments
cugggguacaggacggauggucgaccaguuggaaaguaauuguuucuaauguACUUCACCUGGUCCACUAGCUGUccguacccacugcag
...((((((.((((((.((((.((((((.(((..((((((((....)))).))))))).)))))).)))).)))))))))))).......

Structure
----cug      a      a    c      u   aa    -    u 
       ggguac ggacgg uggu gaccag ugg  agua auug u
       |||||| |||||| |||| |||||| |||  |||| ||||  
       cccaug ccUGUC AUCA CUGGUC ACU  UCAu uaau u
gacguca      -      G    C      C   --    g    c 


Annotation confidence Not enough data
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Genome context
chr21: 67881761-67881850 [+]
Clustered miRNAs
15 other miRNAs are < 10 kb from bta-mir-412
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-412

Accession MIMAT0009313
Description Bos taurus bta-miR-412 mature miRNA
Sequence 53 - ACUUCACCUGGUCCACUAGCUGU - 75
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39

  2. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125