Stem-loop bta-mir-656

Accession

MI0009883

Description

Bos taurus bta-mir-656 precursor miRNA

Gene family

MIPF0000018; mir-154

Literature search

1 open access papers mention bta-mir-656
(1 sentences)

Sequence

44 reads, 2 reads per million, 24 experiments

cugaaauagguugccugugagguguucacuuuucuaagcgaugAAUAUUAUACAGUCAACCUCUuuccgauaucgaauc
..((((.((((((.(((((.(((((((((((....)))...)))))))).))))).)))))).))))............

Structure

----------cu    u      c     a        ---   u 
            gaaa agguug cugug gguguuca   cuu u
            |||| |||||| ||||| ||||||||   |||  
            cuuU UCCAAC GACAU UUAUAAgu   gaa c
cuaagcuauagc    C      U     A        agc   u 

Annotation confidence Not enough data

Genome context

chr21: 67883062-67883140 [+]

Clustered miRNAs

12 other miRNAs are < 10 kb from bta-mir-656

Mature bta-miR-656

• Accession: MIMAT0009361
• Description: Bos taurus bta-miR-656 mature miRNA
• Sequence: 44 - AAUAUUAUACAGUCAACCUCU - 64
• Evidence: not_experimental

References

1. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125