miRBase entry: mmu-mir-1934

Stem-loop mmu-mir-1934


Accession
MI0009923
Symbol
MGI: Mir1934
Description
Mus musculus mmu-mir-1934 precursor miRNA

Literature search
1 open access papers mention mmu-mir-1934
(1 sentences)

Sequence

5968 reads, 79 reads per million, 100 experiments
cugggccuucuuUCUGGUCCCCUGCUUCGUCCUCUguccagauguuaagAGGAUGACGGUGGGGCUGGUGAgauggcucagcg
(((((((.((((.(((((((((((..(((((((((............)))))))))))).)))))))).)))).)))))))..

Structure
--       u    U        -   CU         gucca 
  cugggcc ucuu CUGGUCCC CUG  UCGUCCUCU     g
  ||||||| |||| |||||||| |||  |||||||||      
  gacucgg agAG GGUCGGGG GGC  AGUAGGAga     a
gc       u    U        U   --         auugu 


Annotation confidence High
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Genome context
chr11: 69663043-69663125 [+]

Database links

Mature mmu-miR-1934-5p

Accession MIMAT0009398
Description Mus musculus mmu-miR-1934-5p mature miRNA
Sequence 13 - UCUGGUCCCCUGCUUCGUCCUCU - 35
Evidence experimental
Illumina [1-2]
Database links
Predicted targets

Mature mmu-miR-1934-3p

Accession MIMAT0017341
Description Mus musculus mmu-miR-1934-3p mature miRNA
Sequence 50 - AGGAUGACGGUGGGGCUGGUGA - 71
Evidence experimental
Illumina [2]
Database links
Predicted targets

References

  1. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009

  2. PubMed ID: 18849523
    In-depth characterization of the microRNA transcriptome in a leukemia progression model
    "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
    "Genome Res (2008) 18:1787-1797