miRBase entry: mmu-mir-669l

Stem-loop mmu-mir-669l


Accession
MI0009942
Symbol
MGI: Mir669l
Description
Mus musculus mmu-mir-669l precursor miRNA
Gene family
MIPF0000316; mir-467

Literature search
8 open access papers mention mmu-mir-669l
(11 sentences)

Sequence

2822 reads, 86 reads per million, 91 experiments
guuugugcaugugcguauAGUUGUGUGUGCAUGUAUAUGUguguauaugaauauacAUAUACAUACACACCCAUAUAUacacgcauucauaugaacac
(((((((.(((((.(((((..((.(((((.((((((((((((((......)))))))))))))).))))).))..))))).))))).)))..))))..

Structure
--    --   c     c     GU  U     C              au 
  guuu  gug augug guauA  UG GUGUG AUGUAUAUGUgugu  a
  ||||  ||| ||||| |||||  || ||||| ||||||||||||||   
  caag  uac uacgc caUAU  AC CACAC UACAUAUAcauaua  u
ca    ua   u     a     AU  C     A              ag 


Annotation confidence High
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Genome context
chr2: 10468971-10469068 [+]
Clustered miRNAs
21 other miRNAs are < 10 kb from mmu-mir-669l
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-669l-5p

Accession MIMAT0009418
Description Mus musculus mmu-miR-669l-5p mature miRNA
Sequence 19 - AGUUGUGUGUGCAUGUAUAUGU - 40
Evidence experimental
Illumina [1-3]
Database links
Predicted targets

Mature mmu-miR-669l-3p

Accession MIMAT0017345
Description Mus musculus mmu-miR-669l-3p mature miRNA
Sequence 57 - AUAUACAUACACACCCAUAUAU - 78
Evidence experimental
Illumina [3]
Database links
Predicted targets

References

  1. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009

  2. PubMed ID: 18849523
    In-depth characterization of the microRNA transcriptome in a leukemia progression model
    "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
    "Genome Res (2008) 18:1787-1797

  3. PubMed ID: 18923076
    Mouse ES cells express endogenous shRNAs, siRNAs, and other Microprocessor-independent, Dicer-dependent small RNAs
    "Babiarz JE, Ruby JG, Wang Y, Bartel DP, Blelloch R"
    "Genes Dev (2008) 22:2773-2785