miRBase entry: mmu-mir-669m-2

Stem-loop mmu-mir-669m-2


Accession
MI0009944
Symbol
MGI: Mir669m-2
Description
Mus musculus mmu-mir-669m-2 precursor miRNA
Gene family
MIPF0000316; mir-467

Literature search
11 open access papers mention mmu-mir-669m-2
(16 sentences)

Sequence

2904 reads, 119 reads per million, 89 experiments
auauuugcauguguguauaguuuUGUGUGCAUGUGCAUGUGUGUAUaugaauauacAUAUACAUCCACACAAACAUAUacaagcaugcacagauauac
((((((((((((.((((((..((((((((.(((((.((((((((......)))))))).))))).))))))))..)))))).)))))))..)))))..

Structure
--     --       g      gu        C     C        AU 
  auauu  ugcaugu uguaua  uuUGUGUG AUGUG AUGUGUGU  a
  |||||  ||||||| ||||||  |||||||| ||||| ||||||||   
  uauag  acguacg acaUAU  AAACACAC UACAU UAcauaua  u
ca     ac       a      AC        C     A        ag 


Annotation confidence High
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Genome context
chr2: 10513434-10513531 [+]
Clustered miRNAs
21 other miRNAs are < 10 kb from mmu-mir-669m-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-669m-5p

Accession MIMAT0017346
Description Mus musculus mmu-miR-669m-5p mature miRNA
Sequence 24 - UGUGUGCAUGUGCAUGUGUGUAU - 46
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature mmu-miR-669m-3p

Accession MIMAT0009419
Description Mus musculus mmu-miR-669m-3p mature miRNA
Sequence 57 - AUAUACAUCCACACAAACAUAU - 78
Evidence experimental
Illumina [1-2]
Database links
Predicted targets

References

  1. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009

  2. PubMed ID: 18849523
    In-depth characterization of the microRNA transcriptome in a leukemia progression model
    "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
    "Genome Res (2008) 18:1787-1797