miRBase entry: mmu-mir-1953

Stem-loop mmu-mir-1953


Accession
MI0009948
Symbol
MGI: Mir1953
Description
Mus musculus mmu-mir-1953 precursor miRNA


Sequence

374 reads, 8 reads per million, 64 experiments
ggugcugccuggucuUGGGAAAGUUCUCAGGCUUCUGagaauuugcaggagcagaaggcugugagguuccccucuuccuggcagcccua
((.((((((.((....(((.((.(((.(((.((((((..............)))))).))).))).)).)))....)).))))))))..

Structure
--  u      u  ucuU   A  G   U   G      agaauu 
  gg gcugcc gg    GGG AA UUC CAG CUUCUG      u
  || |||||| ||    ||| || ||| ||| ||||||       
  cc cgacgg cc    ccc uu gag guc gaagac      g
au  -      u  uucu   c  g   u   g      gaggac 


Annotation confidence Not enough data
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Genome context
chr2: 151967529-151967617 [-]

Database links

Mature mmu-miR-1953

Accession MIMAT0009424
Description Mus musculus mmu-miR-1953 mature miRNA
Sequence 16 - UGGGAAAGUUCUCAGGCUUCUG - 37
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 18849523
    In-depth characterization of the microRNA transcriptome in a leukemia progression model
    "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
    "Genome Res (2008) 18:1787-1797