miRBase entry: mmu-mir-1954

Stem-loop mmu-mir-1954


Accession
MI0009949
Symbol
MGI: Mir1954
Description
Mus musculus mmu-mir-1954 precursor miRNA
Gene family
MIPF0001275; mir-1954

Literature search
1 open access papers mention mmu-mir-1954
(1 sentences)

Sequence

2555 reads, 6984 reads per million, 96 experiments
gaggucagccagaACUGCAGAGUGAGACCCUGUUguuuguuuguuuguuugagacgggguuucucuguguagcccuggcuauccua
.(((..((((((..(((((.((.(((((((((((..................))))))))))).)).)))))..))))))..))).

Structure
g   uc      aA     G  U           guuuguuu 
 agg  agccag  CUGCA AG GAGACCCUGUU        g
 |||  ||||||  ||||| || |||||||||||         
 ucc  ucgguc  gaugu uc cuuuggggcag        u
a   ua      cc     g  u           aguuuguu 


Annotation confidence Not enough data
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Genome context
chr2: 32652329-32652414 [+]

Database links

Mature mmu-miR-1954

Accession MIMAT0009425
Description Mus musculus mmu-miR-1954 mature miRNA
Sequence 14 - ACUGCAGAGUGAGACCCUGUU - 34
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 18849523
    In-depth characterization of the microRNA transcriptome in a leukemia progression model
    "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
    "Genome Res (2008) 18:1787-1797