Stem-loop sequence cfa-mir-300

AccessionMI0010428 (change log)
DescriptionCanis familiaris miR-300 stem-loop
Gene family MIPF0000018; mir-154
Stem-loop
      a    a      g  a     c       ug aug 
5' gcu cuug agagag uu uccuu guguguu  u   a
   ||| |||| |||||| || ||||| |||||||  |   u
3' cga gagc ucucuc aa aggaa cguauaa  a   u
      g    c      g  c     -       gu aug 
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (CanFam3.1; GCA_000002285.2) Overlapping transcripts
chr8: 69271815-69271892 [+]
intergenic
Clustered miRNAs
< 10kb from cfa-mir-300
cfa-mir-543chr8: 69263406-69263463 [+]
cfa-mir-495chr8: 69265169-69265226 [+]
cfa-mir-3958chr8: 69267134-69267274 [+]
cfa-mir-376a-3chr8: 69269752-69269810 [+]
cfa-mir-376cchr8: 69270100-69270185 [+]
cfa-mir-376a-2chr8: 69270499-69270556 [+]
cfa-mir-376bchr8: 69270858-69270956 [+]
cfa-mir-376a-1chr8: 69271259-69271316 [+]
cfa-mir-300chr8: 69271815-69271892 [+]
cfa-mir-1185chr8: 69273204-69273332 [+]
cfa-mir-381chr8: 69274983-69275057 [+]
cfa-mir-487bchr8: 69275496-69275553 [+]
cfa-mir-539chr8: 69276311-69276386 [+]
cfa-mir-889chr8: 69276842-69276980 [+]
cfa-mir-544chr8: 69277656-69277744 [+]
cfa-mir-487achr8: 69281078-69281157 [+]
Database links

Mature sequence cfa-miR-300

Accession MIMAT0009929
Sequence

6 - 

uugaagagagguuauccuucgu

 - 27

Get sequence
Evidence by similarity; MI0000400
Predicted targets

References

1
PMID:18215311 "miRNAminer: a tool for homologous microRNA gene search" Artzi S, Kiezun A, Shomron N BMC Bioinformatics. 9:39(2008).