miRBase entry: bta-mir-29e

Stem-loop bta-mir-29e


Accession
MI0010454
Description
Bos taurus bta-mir-29e precursor miRNA
Gene family
MIPF0000009; mir-29

Literature search
23 open access papers mention bta-mir-29e
(77 sentences)

Sequence

53 reads, 287 reads per million, 33 experiments
cuucuggaagcugguuucacaugguggcuuagauuuuuccaucuuuguaucUAGCAUCAUUUGAAAUCAGUGUUUuaggag
(((((((((((((((((((.((((((.((.((((..............)))))))))))).)))))))))).)))))))))

Structure
         -          c      g  u    uuuucc 
cuucuggaa gcugguuuca auggug cu agau      a
||||||||| |||||||||| |||||| || ||||       
gaggauUUU UGACUAAAGU UACUAC GA Ucua      u
         G          U      -  -    uguuuc 


Annotation confidence Not enough data
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Genome context
chr16: 77815740-77815820 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-29e
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-29e

Accession MIMAT0009953
Description Bos taurus bta-miR-29e mature miRNA
Sequence 52 - UAGCAUCAUUUGAAAUCAGUGUUU - 75
Evidence not_experimental

References

  1. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125