miRBase entry: bta-mir-1248-1

Stem-loop bta-mir-1248-1


Accession
MI0010477
Description
Bos taurus bta-mir-1248-1 precursor miRNA
Gene family
MIPF0000622; mir-1248

Literature search
1 open access papers mention bta-mir-1248-1
(1 sentences)

Sequence

19 reads, 13 reads per million, 12 experiments
uuuACCUUCUUGUAUAAGCACUGUGCUAAAauuacagaaaccaagauagccuugguuuuuguaauaaugcuagcagaguauuacacaagaagaagaggaacugca
.....((((((((.(((..(((.(((((..(((((((((((((((.....))))))))))))))).....))))).))).))).)))))))).............

Structure
--------uuuAC        A   GC   G     ---AA               a 
             CUUCUUGU UAA  ACU UGCUA     auuacagaaaccaag u
             |||||||| |||  ||| |||||     ||||||||||||||| a
             gaagaaca auu  uga acgau     uaauguuuuugguuc g
acgucaaggagaa        c   -a   g     cguaa               c 


Annotation confidence Not enough data
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Genome context
chr1: 81349834-81349938 [-]

Database links

Mature bta-miR-1248

Accession MIMAT0009972
Description Bos taurus bta-miR-1248 mature miRNA
Sequence 4 - ACCUUCUUGUAUAAGCACUGUGCUAAA - 30
Evidence not_experimental

References

  1. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125