Stem-loop sequence sma-let-7

AccessionMI0010673 (change log)
DescriptionSchistosoma mansoni let-7 stem-loop
Gene family MIPF0000002; let-7
Literature search

8 open access papers mention sma-let-7
(17 sentences)

Stem-loop 
   --     -- g     c            gcuu   a 
5'   uggga  g uaguu guugugugguuu    guc a
     |||||  | ||||| ||||||||||||    ||| a
3'   acccu  c gucag caacauaccaga    uag a
   uu     uu g     c            aaau   u
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (WTSI5) Overlapping transcripts
Chr_7: 5118791-5118863 [+]
intergenic
Database links

Mature sequence sma-let-7-5p

Accession MIMAT0010180
Previous IDssma-let-7
Sequence

3 -  

ggagguaguucguuguguggu

 - 23

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Evidence experimental; Illumina [2], SOLiD [2]

Mature sequence sma-let-7-3p

Accession MIMAT0032102
Sequence

49 -  

cauacaaccgacuggcuuucccau

 - 72

Get sequence
Evidence experimental; Illumina [2], SOLiD [2]

References

1
PMID:19107204 "Identification and characterization of novel microRNAs from Schistosoma japonicum" Xue X, Sun J, Zhang Q, Wang Z, Huang Y, Pan W PLoS One. 3:e4034(2008).
2
PMID:24069470 "Sex-biased expression of microRNAs in Schistosoma mansoni" Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M PLoS Negl Trop Dis. 7:e2402(2013).