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miRBase |
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Stem-loop sequence ssc-mir-133a-1 |
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Accession | MI0010681 (change log) | ||||
Previous IDs | ssc-mir-133a | ||||
Description | Sus scrofa miR-133a-1 stem-loop | ||||
Gene family | MIPF0000029; mir-133 | ||||
Literature search |
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40 open access papers mention ssc-mir-133a-1 | ||||
Stem-loop |
- accca uuu a aa u a aacug 5' cgg g aaugc gcua agcuggu aa gg accaaauc u ||| | ||||| |||| ||||||| || || |||||||| 3' gcc c uuacg cgau ucgacca uu cc ugguuuag u g gacag cgu g ac c c guaag |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
Mature sequence ssc-miR-133a-5p |
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Accession | MIMAT0015299 |
Previous IDs | ssc-miR-133a* |
Sequence |
23 - agcugguaaaauggaaccaaau - 44 |
Deep sequencing | 30 reads, 9 experiments |
Evidence | experimental; cloned [3], Illumina [4] |
Mature sequence ssc-miR-133a-3p |
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Accession | MIMAT0010186 |
Previous IDs | ssc-miR-133a |
Sequence |
61 - uugguccccuucaaccagcug - 81 |
Deep sequencing | 1226 reads, 13 experiments |
Evidence | experimental; Illumina [5] |
References |
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1 |
PMID:19196471
"Cloning, characterization and expression analysis of porcine microRNAs"
BMC Genomics. 10:65(2009).
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2 |
PMID:19917043
"MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing"
Anim Genet. 41:159-168(2010).
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3 |
PMID:20180025
"Cloning and characterization of microRNAs from porcine skeletal muscle and adipose tissue"
Mol Biol Rep. 37:3567-3574(2010).
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4 |
PMID:21312241
"MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing"
J Cell Biochem. 112:1318-1328(2011).
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5 |
PMID:24499489
"Exploration of microRNAs in porcine milk exosomes"
BMC Genomics. 15:100(2014).
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