Stem-loop sme-mir-2203

Accession

MI0010950

Description

Schmidtea mediterranea sme-mir-2203 precursor miRNA

Sequence

aaaaauuuACGAAGGCUUAAUGAUUAUCAUuuacaaaccaaauuaaauuaAUCAAGAUCGUUAGUAAGUUuu
.(((((((((.((.(.((..((((((..(((((..........))))))))))).)).).)).)))))))))

Structure

a         G  G C  AA      UC     caaa 
 aaaauuuAC AA G UU  UGAUUA  AUuua    c
 ||||||||| || | ||  ||||||  |||||     
 uuUUGAAUG UU C AG  ACUAau  uaaau    c
-         A  G U  -A      --     uaaa 

Annotation confidence Not enough data

Genome context

Contig43306: 3412-3483 [+]

Mature sme-miR-2203-5p

• Accession: MIMAT0011419
• Description: Schmidtea mediterranea sme-miR-2203-5p mature miRNA
• Sequence: 9 - ACGAAGGCUUAAUGAUUAUCAU - 30
• Evidence: experimental ; Illumina [1]

Mature sme-miR-2203-3p

• Accession: MIMAT0011420
• Description: Schmidtea mediterranea sme-miR-2203-3p mature miRNA
• Sequence: 51 - AUCAAGAUCGUUAGUAAGUU - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19553344
   Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea
   "Lu YC, Smielewska M, Palakodeti D, Lovci MT, Aigner S, Yeo GW, Graveley BR"
   "RNA (2009) 15:1483-1491