Stem-loop bta-mir-2300a

Accession

MI0011310

Description

Bos taurus bta-mir-2300a precursor miRNA

Literature search

1 open access papers mention bta-mir-2300a
(1 sentences)

Sequence

502 reads, 1.0 reads per million, 59 experiments

caucuuauuccUCAGCUAGUUUUGUCUCCCUGUgugugaucauaaGCAGGGAGGCAAAACUAGCUAAggaauaagaug
((((((((((((.(((((((((((((((((((((((....)))..)))))))))))))))))))).))))))))))))

Structure

            C                    --   u 
caucuuauuccU AGCUAGUUUUGUCUCCCUGU  gug g
|||||||||||| ||||||||||||||||||||  |||  
guagaauaaggA UCGAUCAAAACGGAGGGACG  uac a
            A                    aa   u 

Annotation confidence High

Genome context

12: 31797031-31797108 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-2300a

Mature bta-miR-2300a-5p

• Accession: MIMAT0011809
• Description: Bos taurus bta-miR-2300a-5p mature miRNA
• Sequence: 12 - UCAGCUAGUUUUGUCUCCCUGU - 33
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2300a-3p

• Accession: MIMAT0050913
• Description: Bos taurus bta-miR-2300a-3p mature miRNA
• Sequence: 46 - GCAGGGAGGCAAAACUAGCUAA - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349