Stem-loop bta-mir-2300a

Accession

MI0011310

Description

Bos taurus bta-mir-2300a precursor miRNA

Literature search

1 open access papers mention bta-mir-2300a
(1 sentences)

Sequence

70 reads, 1 reads per million, 33 experiments

caucuuauUCCUCAGCUAGUUUUGUCUCCCugugugugaucauaagcagggaggcaaaacuagcuaaggaauaagaug
((((((((((((.(((((((((((((((((((((((....)))..)))))))))))))))))))).))))))))))))

Structure

            C                    --   u 
caucuuauUCCU AGCUAGUUUUGUCUCCCugu  gug g
|||||||||||| ||||||||||||||||||||  |||  
guagaauaagga ucgaucaaaacggagggacg  uac a
            a                    aa   u 

Annotation confidence Not enough data

Genome context

chr12: 31918144-31918221 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-2300a

Mature bta-miR-2300a-5p

• Accession: MIMAT0011809
• Description: Bos taurus bta-miR-2300a-5p mature miRNA
• Sequence: 9 - UCCUCAGCUAGUUUUGUCUCCC - 30
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349