miRBase entry: bta-mir-2308

Stem-loop bta-mir-2308


Accession
MI0011321
Description
Bos taurus bta-mir-2308 precursor miRNA

Literature search
1 open access papers mention bta-mir-2308
(1 sentences)

Sequence

94 reads, 9 reads per million, 28 experiments
cucaguccucugcuaaagcccaccugugcucccgccuggaaagUUGGGCUUGCAGCAGAGAGUAAggag
(((...((((((((.(((((((((.(.((....))).)).....)))))))..))))))).)....)))

Structure
   -agu -       -a       -----  u u  u 
cuc    c cucugcu  aagccca     cc g gc c
|||    | |||||||  |||||||     || | ||  
gag    G GAGACGA  UUCGGGU     gg c cg c
   gAAU A       CG       Ugaaa  u -  c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr14: 1612166-1612234 [+]

Database links

Mature bta-miR-2308

Accession MIMAT0011820
Description Bos taurus bta-miR-2308 mature miRNA
Sequence 44 - UUGGGCUUGCAGCAGAGAGUAA - 65
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349

  2. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026