Stem-loop sequence bta-mir-2284v

Accession

MI0011425 (change log)

Description

Bos taurus miR-2284v stem-loop

Literature search

13 open access papers mention bta-mir-2284v
(32 sentences)

Stem-loop

      a  uu       gaa    guguu  a 
5' gga gg  cuccaag   gacu     gc g
   ||| ||  |||||||   ||||     ||  
3' ccu cu  gggguuu   uuga     cg u
      -  uu       -gc    aaaac  g 

Deep sequencing

8501 reads, 26.9 reads per million, 67 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr25: 23762326-23762385 [-]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:MIR2284V
• miRBase Tracker:MI0011425

Mature sequence bta-miR-2284v

• Accession: MIMAT0011937
• Sequence: 37 - aaaaaguucguuugggguuu - 56
• Deep sequencing: 8500 reads, 68 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetScanVert:bta-miR-2284v

References

1. PMID:19633723 "Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection" Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ PLoS One. 4:e6349(2009).