miRBase entry: bta-mir-2404-1

Stem-loop bta-mir-2404-1


Accession
MI0011446
Description
Bos taurus bta-mir-2404-1 precursor miRNA
Gene family
MIPF0000776; mir-2404

Literature search
3 open access papers mention bta-mir-2404-1
(3 sentences)

Sequence

29 reads, 8 reads per million, 22 experiments
aUUGCACUGCAUGGUAUCUGCauucagcaguuuguuccugcuggcuguucaaaagacagugcgau
(((((((((..(.......(((.(((((((.......))))))).))).....)..)))))))))

Structure
         CA GGUAUCU   u       uu 
aUUGCACUG  U       GCa ucagcag  u
|||||||||  |       ||| |||||||  g
uagcgugac  a       ugu ggucguc  u
         ag --aaacu   c       cu 


Annotation confidence Not enough data
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Genome context
chr17: 6182519-6182583 [-]

Database links

Mature bta-miR-2404

Accession MIMAT0011961
Description Bos taurus bta-miR-2404 mature miRNA
Sequence 2 - UUGCACUGCAUGGUAUCUGC - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349