miRBase entry: bta-mir-1777b

Stem-loop bta-mir-1777b


Accession
MI0011520
Description
Bos taurus bta-mir-1777b precursor miRNA

Literature search
3 open access papers mention bta-mir-1777b
(3 sentences)

Sequence

5 reads, 2 reads per million, 4 experiments
cuggcucucucuguugccauggcaccggccggagaugaggcucugGGGGGCGGUGGGGGGCGGGGuugcagggaggacag
(((..(((((((((((((....(((((.((((((......))))...)).)))))...)))).....))))))))).)))

Structure
   gc         -----    augg     g  ---    au 
cug  ucucucugu     ugcc    caccg cc   ggag  g
|||  |||||||||     ||||    ||||| ||   ||||   
gac  ggagggacg     GCGG    GUGGC GG   ucuc  a
   -a         uuGGG    -GGG     G  GGg    gg 


Annotation confidence Not enough data
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Genome context
chr7: 63811144-63811223 [-]

Database links

Mature bta-miR-1777b

Accession MIMAT0012046
Description Bos taurus bta-miR-1777b mature miRNA
Sequence 46 - GGGGGCGGUGGGGGGCGGGG - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349