miRBase entry: bta-mir-664a

Stem-loop bta-mir-664a


Accession
MI0011547
Description
Bos taurus bta-mir-664a precursor miRNA
Gene family
MIPF0000300; mir-664

Literature search
3 open access papers mention bta-mir-664a
(3 sentences)

Sequence

17 reads, 6 reads per million, 9 experiments
gggacauuaaaacaCAGGCUGGGGUGUGUGUGGAUGgagacuguuacucuauucguuuacucccuagccuccagauaugccu
(((.(((........(((((((((.(((.((((((((((.......)))))))))).))).)))))))))......))))))

Structure
   a   uaaaacaC         U   U          ac 
ggg cau        AGGCUGGGG GUG GUGGAUGgag  u
||| |||        ||||||||| ||| ||||||||||  g
ucc gua        uccgauccc cau ugcuuaucuc  u
   -   --uagacc         u   u          au 


Annotation confidence Not enough data
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Genome context
chrX: 39531384-39531465 [-]

Database links

Mature bta-miR-664a

Accession MIMAT0012078
Description Bos taurus bta-miR-664a mature miRNA
Sequence 15 - CAGGCUGGGGUGUGUGUGGAUG - 36
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349