miRBase entry: dme-mir-2493

Stem-loop dme-mir-2493


Accession
MI0011582
Description
Drosophila melanogaster dme-mir-2493 precursor miRNA


Sequence

131 reads, 20 reads per million, 22 experiments
cgcuauuauuaaaacccccaacGCUCACACACACACACAGCCAugugcauggagcaaaaaacuauggCCGUGUGUAUUUGUGCGAGGCGUuggcguucugaccagc
.(((....(((.(((..(((((((((.((((.((((((.(((((((((.....)))......)))))).))))))...)))).)).))))))).))).)))..)))

Structure
c   auua   a   cc       -  A    --C      A      ------   a 
 gcu    uua aac  ccaacGC UC CACA   ACACAC GCCAug      ugc u
 |||    ||| |||  ||||||| || ||||   |||||| ||||||      ||| g
 cga    agu uug  gguUGCG AG GUGU   UGUGUG Cgguau      acg g
-   --cc   c   -c       G  C    UUA      C      caaaaa   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr3R: 15130754-15130859 [-]

Database links

Mature dme-miR-2493-5p

Accession MIMAT0012200
Description Drosophila melanogaster dme-miR-2493-5p mature miRNA
Sequence 23 - GCUCACACACACACACAGCCA - 43
Evidence experimental
Illumina [1]

Mature dme-miR-2493-3p

Accession MIMAT0012201
Description Drosophila melanogaster dme-miR-2493-3p mature miRNA
Sequence 68 - CCGUGUGUAUUUGUGCGAGGCGU - 90
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9