Stem-loop dsi-mir-955

Accession

MI0011742

Description

Drosophila simulans dsi-mir-955 precursor miRNA

Gene family

MIPF0000989; mir-955

Sequence

ucuuuuuggccagcuaaucaacucCAUCGUGCAGAGGUUUGAGUGUCcuguguuuugccuaaucgCAUUCAAUUUCUGCACGGUAGAgaugguacgcuuagaaacaaccuaaaga
..((((((...(((..((((.(((.((((((((((((((.((((((..................)))))))))))))))))))).))).))))..)))))))))...........

Structure

---------uc      gcc   ua    a   C              U      Ccuguguu 
           uuuuug   agc  auca cuc AUCGUGCAGAGGUU GAGUGU        u
           ||||||   |||  |||| ||| |||||||||||||| ||||||         
           aaagau   ucg  uggu gAG UGGCACGUCUUUAA CUUACg        u
agaaauccaac      ---   ca    a   A              -      cuaauccg 

Annotation confidence Not enough data

Genome context

chr3L: 2834569-2834683 [+]

Mature dsi-miR-955-5p

• Accession: MIMAT0012447
• Description: Drosophila simulans dsi-miR-955-5p mature miRNA
• Sequence: 25 - CAUCGUGCAGAGGUUUGAGUGUC - 47
• Evidence: experimental ; Illumina [1]

Mature dsi-miR-955-3p

• Accession: MIMAT0012448
• Description: Drosophila simulans dsi-miR-955-3p mature miRNA
• Sequence: 66 - CAUUCAAUUUCUGCACGGUAGA - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9