Stem-loop dsi-mir-193

Accession

MI0011744

Description

Drosophila simulans dsi-mir-193 precursor miRNA

Gene family

MIPF0000082; mir-193

Sequence

ccgugugugcccccauuaugguUGGGAUUUUUUAGAUCAGCAGUuauugcuauauagccauauuuauaaaucuucUACUGGCCUACUAAGUCCCAACauaaugagaguaaaaaccacagg
.(.(((((((.(.(((((((.(((((((((..(((...((((.....)))).....((((..................)))))))..)))))))))))))))).).))).....)))).)

Structure

c g    -----   c c       g         UU   AUCAGCAGUuauugcuauaua    uauuuaua 
 c ugug     ugc c cauuaug uUGGGAUUU  UAG                     gcca        a
 | ||||     ||| | ||||||| |||||||||  |||                     ||||         
 g acac     aug g guaauaC AACCCUGAA  AUC                     CGGU        a
- g    caaaa   a a       -         UC   ---------------------    CAUcuucu 

Annotation confidence Not enough data

Genome context

chr3L: 20903317-20903436 [+]

Mature dsi-miR-193-5p

• Accession: MIMAT0012451
• Description: Drosophila simulans dsi-miR-193-5p mature miRNA
• Sequence: 23 - UGGGAUUUUUUAGAUCAGCAGU - 44
• Evidence: experimental ; Illumina [1]

Mature dsi-miR-193-3p

• Accession: MIMAT0012452
• Description: Drosophila simulans dsi-miR-193-3p mature miRNA
• Sequence: 76 - UACUGGCCUACUAAGUCCCAAC - 97
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9