miRBase entry: dsi-mir-999

Stem-loop dsi-mir-999


Accession
MI0011746
Description
Drosophila simulans dsi-mir-999 precursor miRNA
Gene family
MIPF0000852; mir-999


Sequence

ggaugccgcucaauuaccccgACAUAGUCGUACGGUGAAUGUUGuguauuggagaccaaUGUUAACUGUAAGACUGUGUCUcggugguugccagcccagcc
....((.(((((((((((..(((((((((.((((((.(((((((.((.......))))))))).)))))).)))))))))..))))))))..)))...)).

Structure
ggau  --c   --        cc         G      G       u  au 
    gc   gcu  caauuacc  gACAUAGUC UACGGU AAUGUUG gu  u
    ||   |||  ||||||||  ||||||||| |||||| ||||||| ||  g
    cg   cga  guuggugg  CUGUGUCAG AUGUCA UUGUaac ca  g
---c  acc   cc        cU         A      A       -  ga 


Annotation confidence Not enough data
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Genome context
chr3R: 17429603-17429703 [-]

Database links

Mature dsi-miR-999-5p

Accession MIMAT0012455
Description Drosophila simulans dsi-miR-999-5p mature miRNA
Sequence 22 - ACAUAGUCGUACGGUGAAUGUUG - 44
Evidence experimental
Illumina [1]

Mature dsi-miR-999-3p

Accession MIMAT0012456
Description Drosophila simulans dsi-miR-999-3p mature miRNA
Sequence 60 - UGUUAACUGUAAGACUGUGUCU - 81
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9