Stem-loop dsi-mir-980

Accession

MI0011759

Description

Drosophila simulans dsi-mir-980 precursor miRNA

Gene family

MIPF0000890; mir-980

Sequence

aaguugauuguaugucAGUUUUUCAUUUGGCGUGGCUAGCucacuacuuuuuuaauauugcUAGCUGCCUUGUGAAGGGCUUacguguaauugcaguucaacu
.((((((((((((((.((((((((((..(((..(((((((...................))))))))))..)))))))))).))))......)))).))))))

Structure

a      -    ------    c          UU   GU       ucacuacu 
 aguuga uugu      augu AGUUUUUCAU  GGC  GGCUAGC        u
 |||||| ||||      |||| ||||||||||  |||  |||||||        u
 ucaacu gacg      ugca UCGGGAAGUG  CCG  UCGAUcg        u
-      u    uuaaug    U          UU   --       uuauaauu 

Annotation confidence Not enough data

Genome context

chrX: 118268-118370 [-]

Mature dsi-miR-980-5p

• Accession: MIMAT0012481
• Description: Drosophila simulans dsi-miR-980-5p mature miRNA
• Sequence: 17 - AGUUUUUCAUUUGGCGUGGCUAGC - 40
• Evidence: experimental ; Illumina [1]

Mature dsi-miR-980-3p

• Accession: MIMAT0012482
• Description: Drosophila simulans dsi-miR-980-3p mature miRNA
• Sequence: 62 - UAGCUGCCUUGUGAAGGGCUU - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9