Stem-loop mtr-MIR2596

Accession

MI0011833

Description

Medicago truncatula mtr-MIR2596 precursor miRNA

Sequence

guuggguugcaaaagggaUCUAUUUCAUUGUUCCACACAuuuuuucuugaaccuaaauguguggauaaugauauagaucuuuuuugucaacccaaa
.((((((((((((((((((((((.(((((((.((((((((((............))))))))))))))))).)))))))))))))).)))))))).

Structure

g        -              U       U          uuucu 
 uuggguug caaaagggaUCUAU UCAUUGU CCACACAuuu     u
 |||||||| |||||||||||||| ||||||| ||||||||||      
 aacccaac guuuuuucuagaua aguaaua gguguguaaa     g
a        u              u       -          uccaa 

Annotation confidence Not enough data

Genome context

chr3: 22399309-22399404 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mtr-MIR2596

Mature mtr-miR2596

• Accession: MIMAT0013286
• Description: Medicago truncatula mtr-miR2596 mature miRNA
• Sequence: 19 - UCUAUUUCAUUGUUCCACACA - 39
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796