miRBase entry: 19767456

Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules

PubMed ID 19767456
Authors "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
Journal "Plant Cell
Volume 21
Pages 2780-2796

There are 268 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
mtr-MIR169c MI0005577 None chr2 13450873 13450957 + -
mtr-MIR169d MI0005578 None chr2 13468364 13468603 + -
mtr-MIR2086 MI0010539 None chr2 31686255 31686356 - -
mtr-MIR1510a MI0010542 None chr5 18616293 18616456 + -
mtr-MIR2088 MI0010545 None chr8 15599389 15599534 - -
mtr-MIR2119 MI0010698 None chr5 18765366 18765495 - -
mtr-MIR169k MI0011795 None None None -
mtr-MIR2585a MI0011796 None chr4 15526071 15526416 - -
mtr-MIR2585b MI0011797 None chr7 19585618 19585953 + -
mtr-MIR2586a MI0011798 None chr2 20061144 20061339 + -
mtr-MIR2587a MI0011799 None chr7 26611343 26611452 - -
mtr-MIR2587b MI0011800 None chr5 36871746 36871843 - -
mtr-MIR2587c MI0011801 None chr7 26671125 26671234 + -
mtr-MIR2587d MI0011802 None chr8 20166370 20166484 + -
mtr-MIR2587e MI0011803 None chr2 12099555 12099659 - -
mtr-MIR2587f MI0011804 None chr4 41213267 41213371 - -
mtr-MIR2588a MI0011805 None chr5 7675732 7676146 - -
mtr-MIR2588b MI0011806 None chr8 14068100 14068514 - -
mtr-MIR2589 MI0011807 None chr3 41740729 41741094 + -
mtr-MIR2590a MI0011808 None chr8 8885932 8886128 + -
mtr-MIR2590b MI0011809 None chr4 31149740 31149942 + -
mtr-MIR2590c MI0011810 None chr5 36310085 36310286 - -
mtr-MIR2590d MI0011811 None chr5 7888321 7888524 + -
mtr-MIR2590e MI0011812 None chr7 27285345 27285553 + -
mtr-MIR2590f MI0011813 None AC199470.3 30990 31186 - -
mtr-MIR2591 MI0011814 None chr5 14541103 14541512 - -
mtr-MIR2592b MI0011815 None chr2 4195488 4195736 + -
mtr-MIR2592c MI0011816 None chr2 14759353 14759601 - -
mtr-MIR2592d MI0011817 None chr3 29660782 29661036 - -
mtr-MIR2592e MI0011818 None chr3 29660779 29661036 + -
mtr-MIR2592f MI0011819 None chr3 37671574 37671831 + -
mtr-MIR2592i MI0011820 None chr3 41946048 41946305 - -
mtr-MIR2592j MI0011821 None chr5 18620902 18621150 + -
mtr-MIR2592o MI0011822 None chr4 34969555 34969812 + -
mtr-MIR2592p MI0011823 None chr4 47247439 47247694 + -
mtr-MIR2592q MI0011824 None chr4 47247440 47247696 - -
mtr-MIR2592r MI0011825 None chr7 7995654 7995911 + -
mtr-MIR2592s MI0011826 None chr6 18079450 18079703 + -
mtr-MIR2593a MI0011827 None chr4 46167544 46167659 + -
mtr-MIR2593b MI0011828 None chr1 26182057 26182171 - -
mtr-MIR2593c MI0011829 None chr3 27953809 27953923 + -
mtr-MIR2594 MI0011830 None chr4 19673181 19673259 + -
mtr-MIR2595 MI0011832 None chr7 10658083 10658222 + -
mtr-MIR2596 MI0011833 None chr3 22399309 22399404 + -
mtr-MIR2597 MI0011834 None chr6 18776013 18776119 - -
mtr-MIR2111c MI0011836 None chr7 16686087 16686193 - -
mtr-MIR2111d MI0011838 None None None -
mtr-MIR2111e MI0011839 None chr7 16678770 16678875 - -
mtr-MIR2111g MI0011841 None None None -
mtr-MIR2111h MI0011842 None chr7 16655725 16655830 - -
mtr-MIR2111i MI0011843 None None None -
mtr-MIR2111m MI0011844 None chr7 16637685 16637791 - -
mtr-MIR2111n MI0011846 None chr7 16637529 16637662 - -
mtr-MIR2111o MI0011847 None chr7 16621471 16621577 - -
mtr-MIR2598 MI0011848 None chr4 37313308 37313643 + -
mtr-MIR2599 MI0011849 None chr1 12574785 12574956 - -
mtr-MIR2600a MI0011850 None chr7 6096933 6097045 + -
mtr-MIR2601 MI0011851 None chr4 45064513 45064729 + -
mtr-MIR2602a MI0011852 None chr5 13768425 13768594 + -
mtr-MIR2602b MI0011853 None chr5 38414668 38414836 - -
mtr-MIR2603 MI0011854 None chr4 38174285 38174600 + -
mtr-MIR2604 MI0011855 None chr6 5273845 5274131 + -
mtr-MIR2605 MI0011856 None chr8 31560873 31561155 + -
mtr-MIR2606a MI0011857 None chr3 23050085 23050271 - -
mtr-MIR2606b MI0011858 None chr4 46561956 46562129 - -
mtr-MIR2607 MI0011860 None chr6 3391869 3391981 + -
mtr-MIR2608 MI0011861 None chr3 29324716 29324927 + -
mtr-MIR2609a MI0011862 None chr2 14996815 14997071 + -
mtr-MIR2609b MI0011863 None chr2 15047841 15048097 + -
mtr-MIR2610a MI0011865 None chr6 10558277 10558688 - -
mtr-MIR2610b MI0011866 None chr7 2035062 2035473 + -
mtr-MIR2611 MI0011867 None chr2 4044572 4044867 + -
mtr-MIR169j MI0011868 None chr2 13454079 13454208 + -
mtr-MIR2585c MI0011869 None chr5 11514537 11514874 - -
mtr-MIR2585d MI0011870 None chr6 19511859 19512226 + -
mtr-MIR2612 MI0011872 None chr4 24076464 24076595 + -
mtr-MIR2613 MI0011874 None chr5 9706906 9707054 - -
mtr-MIR2614 MI0011875 None chr3 27920429 27920589 - -
mtr-MIR2615a MI0011876 None chr5 3236093 3236350 - -
mtr-MIR2615b MI0011877 None chr5 3250863 3251120 - -
mtr-MIR2615c MI0011878 None chr7 2027418 2027632 + -
mtr-MIR2616 MI0011879 None chr5 5651277 5651571 - -
mtr-MIR1509b MI0011880 None chr3 22804649 22804764 + -
mtr-MIR2617a MI0011881 None chr3 35129122 35129210 + -
mtr-MIR2617c MI0011882 None chr3 9118230 9118347 + -
mtr-MIR2617b MI0011883 None chr8 9343767 9343852 - -
mtr-MIR2618a MI0011884 None chr7 2591225 2591564 - -
mtr-MIR2618b MI0011885 None chr7 28342357 28342643 - -
mtr-MIR2619a MI0011886 None chr8 20630374 20630622 + -
mtr-MIR2620 MI0011887 None chr6 13118436 13118648 - -
mtr-MIR2621 MI0011888 None chr6 6977916 6978108 - -
mtr-MIR2622 MI0011889 None chr3 28572579 28572666 - -
mtr-MIR2623 MI0011890 None chr5 31771069 31771192 - -
mtr-MIR2624 MI0011891 None chr1 20017715 20017776 + -
mtr-MIR2625 MI0011893 None chr2 2760406 2760587 + -
mtr-MIR2626 MI0011894 None chr2 20180560 20180812 + -
mtr-MIR2627 MI0011895 None chr2 5283120 5283217 - -
mtr-MIR2592a MI0011896 None chr1 28276324 28276577 + -
mtr-MIR2592g MI0011897 None chr3 35460535 35460792 - -
mtr-MIR2592h MI0011898 None chr3 36122992 36123246 + -
mtr-MIR2592k MI0011899 None chr6 16339495 16339750 - -
mtr-MIR2592l MI0011900 None chr4 38243118 38243371 - -
mtr-MIR2592m MI0011901 None chr4 38273113 38273366 - -
mtr-MIR2592n MI0011902 None chr4 42952619 42952873 - -
mtr-MIR2111b MI0011905 None None None -
mtr-MIR2111j MI0011907 None chr7 16649192 16649293 - -
mtr-MIR2111k MI0011908 None chr7 16644233 16644366 - -
mtr-MIR2628 MI0011909 None chr6 13971174 13971320 + -
mtr-MIR2629a MI0011910 None chr8 28139350 28139408 + -
mtr-MIR2629d MI0011911 None chr3 15594507 15594601 + -
mtr-MIR2629e MI0011912 None chr4 28317266 28317374 + -
mtr-MIR2629b MI0011913 None chr4 8421848 8421908 + -
mtr-MIR2629c MI0011914 None chr4 8596645 8596705 + -
mtr-MIR2629f MI0011915 None chr5 20006463 20006549 - -
mtr-MIR2629g MI0011916 None chr7 13457501 13457774 + -
mtr-MIR2630a MI0011917 None chr3 40621429 40621657 + -
mtr-MIR2630b MI0011918 None chr1 552478 552706 - -
mtr-MIR2630c MI0011919 None chr1 23684220 23684449 - -
mtr-MIR2630w MI0011920 None chr1 23684222 23684450 + -
mtr-MIR2630x MI0011921 None chr1 27586224 27586451 + -
mtr-MIR2630y MI0011922 None chr2 11627635 11627860 - -
mtr-MIR2630d MI0011923 None chr3 23128153 23128381 - -
mtr-MIR2630e MI0011924 None chr3 37979010 37979238 - -
mtr-MIR2630f MI0011925 None chr3 38109549 38109777 + -
mtr-MIR2630g MI0011926 None chr3 28083847 28084075 + -
mtr-MIR2630h MI0011927 None chr5 3355277 3355505 + -
mtr-MIR2630i MI0011928 None chr4 1908805 1909032 - -
mtr-MIR2630j MI0011929 None chr4 9612541 9612769 - -
mtr-MIR2630k MI0011930 None chr4 9694217 9694445 - -
mtr-MIR2630l MI0011931 None chr5 15543381 15543609 + -
mtr-MIR2630m MI0011932 None chr5 18370582 18370811 - -
mtr-MIR2630n MI0011933 None chr5 5676117 5676345 - -
mtr-MIR2630o MI0011934 None chr5 6240185 6240412 + -
mtr-MIR2630p MI0011935 None chr4 4799279 4799508 + -
mtr-MIR2630q MI0011936 None chr6 18839111 18839338 - -
mtr-MIR2630r MI0011937 None chr6 11208478 11208706 - -
mtr-MIR2630s MI0011938 None chr7 31925699 31925927 + -
mtr-MIR2630t MI0011939 None chr7 208036 208264 - -
mtr-MIR2630u MI0011940 None chr8 20150884 20151112 + -
mtr-MIR2630v MI0011941 None chr4 38608657 38608885 + -
mtr-MIR2631 MI0011942 None chr4 16639232 16639550 - -
mtr-MIR2632a MI0011943 None chr5 14319353 14319539 + -
mtr-MIR2632b MI0011944 None chr6 12646949 12647142 - -
mtr-MIR2632c MI0011945 None chr4 46415896 46416217 + -
mtr-MIR2633 MI0011946 None chr5 25828393 25828510 + -
mtr-MIR2634 MI0011947 None chr4 30275846 30275948 - -
mtr-MIR2635 MI0011948 None chr5 4841515 4841667 + -
mtr-MIR2636 MI0011949 None chr5 27514652 27514771 - -
mtr-MIR2637 MI0011950 None chr7 11864066 11864189 + -
mtr-MIR2638a MI0011951 None chr5 6758481 6758749 + -
mtr-MIR2638b MI0011952 None chr5 6758482 6758750 - -
mtr-MIR2639 MI0011953 None chr3 10235233 10235329 + -
mtr-MIR2640 MI0011954 None chr1 33982196 33982485 - -
mtr-MIR2641 MI0011956 None chr4 1951990 1952220 + -
mtr-MIR2642 MI0011957 None chr3 1759989 1760079 + -
mtr-MIR2643a MI0011958 None chr2 19533371 19533608 - -
mtr-MIR2644 MI0011959 None chr4 17526726 17526944 + -
mtr-MIR2645 MI0011961 None chr4 27289822 27290031 + -
mtr-MIR2646a MI0011962 None chr4 28796917 28797205 - -
mtr-MIR2646b MI0011963 None chr5 3631562 3631816 + -
mtr-MIR2647a MI0011964 None chr4 10427955 10428148 - -
mtr-MIR2647b MI0011965 None chr4 10570190 10570383 - -
mtr-MIR2647c MI0011966 None chr4 41982156 41982349 + -
mtr-MIR2648 MI0011967 None chr5 37785921 37786058 - -
mtr-MIR2649 MI0011968 None chr6 19670625 19670729 + -
mtr-MIR2650 MI0011969 None chr5 3163401 3163578 + -
mtr-MIR2651 MI0011970 None chr2 31685421 31685567 - -
mtr-MIR2652a MI0011971 None chr1 30023475 30023721 - -
mtr-MIR2652b MI0011972 None chr1 10180420 10180654 - -
mtr-MIR2652c MI0011973 None chr2 12812990 12813216 - -
mtr-MIR2652d MI0011974 None chr2 12812989 12813215 + -
mtr-MIR2652e MI0011975 None chr4 31385772 31386018 + -
mtr-MIR2652f MI0011976 None chr5 34904296 34904481 + -
mtr-MIR2652g MI0011977 None chr5 38127389 38127622 + -
mtr-MIR2652h MI0011978 None chr5 7029666 7029913 + -
mtr-MIR2652i MI0011979 None chr6 21529035 21529269 + -
mtr-MIR2652j MI0011980 None chr8 17937327 17937552 - -
mtr-MIR2652k MI0011981 None chr4 43002052 43002283 - -
mtr-MIR2652l MI0011982 None chr4 45334580 45334804 + -
mtr-MIR2653a MI0011983 None chr6 6968353 6968618 - -
mtr-MIR2653b MI0011984 None chr6 15435274 15435539 + -
mtr-MIR2653c MI0011985 None chr6 15823986 15824251 + -
mtr-MIR2654 MI0011986 None chr3 31151589 31151696 + -
mtr-MIR2655a MI0011987 None chr3 40642836 40643102 + -
mtr-MIR2655b MI0011988 None chr7 18275180 18275404 + -
mtr-MIR2655c MI0011989 None chr1 20434620 20434884 + -
mtr-MIR2655d MI0011990 None chr1 23673623 23673889 + -
mtr-MIR2655e MI0011991 None chr2 13982332 13982546 + -
mtr-MIR2655f MI0011992 None chr2 11522984 11523249 - -
mtr-MIR2655g MI0011993 None chr3 35510189 35510454 - -
mtr-MIR2655h MI0011994 None chr7 17456062 17456295 + -
mtr-MIR2655i MI0011995 None chr3 11020308 11020584 - -
mtr-MIR2655j MI0011996 None chr4 12695849 12696115 + -
mtr-MIR2655k MI0011997 None chr4 20298253 20298518 - -
mtr-MIR2655l MI0011998 None chr5 14236286 14236551 - -
mtr-MIR2655m MI0011999 None chr5 18553085 18553344 + -
mtr-MIR2655n MI0012000 None chr7 677525 677759 - -
mtr-MIR2655o MI0012001 None chr7 677526 677760 + -
mtr-MIR2656a MI0012002 None chr1 10247160 10247286 + -
mtr-MIR2656b MI0012003 None chr8 13877779 13877906 + -
mtr-MIR2657 MI0012004 None chr7 23479463 23479721 - -
mtr-MIR2658 MI0012006 None chr5 40662275 40662388 - -
mtr-MIR2659a MI0012007 None chr2 32205034 32205238 - -
mtr-MIR2659b MI0012008 None chr3 12835653 12835857 + -
mtr-MIR2659c MI0012009 None chr5 9085629 9085833 + -
mtr-MIR2659d MI0012010 None chr5 24064026 24064230 + -
mtr-MIR2659e MI0012011 None chr3 11639258 11639460 - -
mtr-MIR2659f MI0012012 None chr5 35574877 35575081 - -
mtr-MIR2660 MI0012013 None chr4 9445467 9445528 - -
mtr-MIR2661 MI0012015 None chr3 18890004 18890141 + -
mtr-MIR2662 MI0012016 None chr1 20744212 20744554 - -
mtr-MIR2663 MI0012017 None chr4 10589879 10589992 - -
mtr-MIR2664a MI0012018 None chr6 22308272 22308492 - -
mtr-MIR2665 MI0012019 None chr5 16554970 16555082 - -
mtr-MIR2666 MI0012020 None chr4 3266952 3267376 - -
mtr-MIR2667a MI0012021 None None None -
mtr-MIR2668 MI0012022 None chr3 25640792 25640911 + -
mtr-MIR2669a MI0012023 None chr8 22210698 22210807 - -
mtr-MIR399q MI0012024 None chr1 30126820 30126993 + -
mtr-MIR2670a MI0012025 None chr2 24709014 24709241 + -
mtr-MIR2670b MI0012026 None chr4 23357485 23357708 - -
mtr-MIR2670c MI0012027 None chr5 10276042 10276263 + -
mtr-MIR2670d MI0012028 None chr8 3203936 3204159 + -
mtr-MIR2671j MI0012029 None chr4 243605 243706 + -
mtr-MIR2671a MI0012030 None chr4 19714431 19714790 - -
mtr-MIR2671b MI0012031 None chr8 22898470 22898828 - -
mtr-MIR2671c MI0012032 None chr5 16668115 16668473 - -
mtr-MIR2671d MI0012033 None chr5 22261365 22261724 + -
mtr-MIR2671e MI0012034 None chr5 41342486 41342866 + -
mtr-MIR2671f MI0012035 None chr5 42437335 42437693 - -
mtr-MIR2671g MI0012036 None chr7 7256648 7257007 + -
mtr-MIR2671h MI0012037 None chr4 46468156 46468485 + -
mtr-MIR2671i MI0012038 None chr8 4398878 4399235 - -
mtr-MIR2672 MI0012039 None chr7 32832806 32832935 + -
mtr-MIR2673a MI0012040 None chr3 36153447 36153693 - -
mtr-MIR2673b MI0012041 None chr5 20465409 20465684 - -
mtr-MIR2674 MI0012042 None chr6 17900754 17901047 - -
mtr-MIR2675 MI0012043 None chr3 35808536 35808708 - -
mtr-MIR2676a MI0012045 None chr1 25975055 25975287 - -
mtr-MIR2676b MI0012046 None None None -
mtr-MIR2676c MI0012047 None chr2 880135 880370 + -
mtr-MIR2676d MI0012048 None None None -
mtr-MIR2676e MI0012049 None None None -
mtr-MIR2676f MI0012050 None chr7 31692186 31692374 + -
mtr-MIR2677 MI0012052 None chr7 9566290 9566544 + -
mtr-MIR2678 MI0012053 None chr6 19671276 19671704 - -
mtr-MIR2679a MI0012054 None chr2 26916150 26916268 + -
mtr-MIR2679b MI0012055 None chr4 16967159 16967277 - -
mtr-MIR2679c MI0012056 None AC145023.4 61375 61493 - -
mtr-MIR2680a MI0012057 None chr1 33174370 33174537 - -
mtr-MIR2680b MI0012058 None chr5 28991511 28991678 + -
mtr-MIR2680c MI0012059 None chr2 27957823 27957990 + -
mtr-MIR2680d MI0012060 None chr3 6163059 6163226 + -
mtr-MIR2680e MI0012061 None chr4 22719484 22719651 + -
mtr-MIR2587g MI0025204 None chr4 38288598 38288702 + -
mtr-MIR2652m MI0025205 None chr6 21568846 21569080 + -
mtr-MIR2653d MI0025206 None chr6 15865275 15865540 - -
mtr-MIR2656c MI0025207 None chr5 35302672 35302798 - -
mtr-MIR2656d MI0025208 None chr7 12262943 12263069 - -
mtr-MIR2656e MI0025209 None chr7 12367058 12367184 + -
mtr-MIR2659g MI0025210 None chr7 7636521 7636725 + -
mtr-MIR2659h MI0025211 None chr7 7668230 7668434 + -
mtr-MIR2659i MI0025212 None chr7 18927123 18927327 + -
mtr-MIR2659j MI0025213 None chr8 237902 238106 - -
mtr-MIR2659k MI0025214 None chr8 381287 381491 - -
mtr-MIR2664b MI0025215 None chr6 22852049 22852269 - -
mtr-MIR2667b MI0025216 None None None -
mtr-MIR2669b MI0025217 None chr8 22248078 22248187 + -



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