Dead hairpin entry

Stem-loop mtr-MIR2630y

Accession

MI0011922

Description

Medicago truncatula mtr-MIR2630y precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

2 open access papers mention mtr-MIR2630y
(2 sentences)

Sequence

32980 reads, 305.0 reads per million, 111 experiments

acugcaaauauaaaaaauuUGGUUUUGGUCCUUGGUAUUUuguuuuaguccuuguaaaauugauucauauuggauuuggucauuguaauauguagaauauuugauuuuagucccucaaaaugAGGACUAAAAUGAAUAUUAUAGggaccaauuucaauaugaaaugauuuuacaaggauuaaaacaaaauaccaaggaucaaaaccaaauauucuauauuugcagg
.(((((((((((.((.((((((((((((((((((((((((((((((((((((((((((((((.(((((((((((.((((((.(((((((((..........(.((((((((((.(((...))))))))))))).)))))))))).)))))).))))))))))).)))))))))))))))))))))))))))))))))))))))))))))).)).))))))))))).

Structure

a           a  a                                              a           u      a         guagaauauu g          c   a 
 cugcaaauaua aa auuUGGUUUUGGUCCUUGGUAUUUuguuuuaguccuuguaaaauug uucauauugga uugguc uuguaauau          u auuuuagucc uca  
 ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||          | |||||||||| ||| a
 gacguuuauau uu uaaaccaaaacuaggaaccauaaaacaaaauuaggaacauuuuagu aaguauaacuu aaccag GAUAUUAUA          A UAAAAUCAGG Agu  
g           c  a                                              a           u      g         ---------- G          -   a