Stem-loop mtr-MIR2629e

Accession

MI0011912

Description

Medicago truncatula mtr-MIR2629e precursor miRNA

Sequence

21473 reads, 194.0 reads per million, 111 experiments

aagaugcaguuaauugcggaAGUUUUCCUCGGUAGUUAACUgcagucaguuccaauaaaauucgacaguuagcugccgAGGGACAUUUGAAUAAUUUAuauguauuuug
((((((((...(((((...((((.((((((((((((((((((..(.................)..)))))))))))))))))).))))...)))))....)))))))).

Structure

-        -guu     cgg    U                  ca ucaguuc 
 aagaugca    aauug   aAGU UUCCUCGGUAGUUAACUg  g       c
 ||||||||    |||||   |||| ||||||||||||||||||  |       a
 uuuuaugu    UUAAU   UUUA AGGGAgccgucgauugac  c       a
g        auAU     AAG    C                  ag uuaaaau 

Annotation confidence Low

Genome context

chr4: 28317266-28317374 [+]

Mature mtr-miR2629e-5p

• Accession: MIMAT0013365
• Description: Medicago truncatula mtr-miR2629e-5p mature miRNA
• Sequence: 21 - AGUUUUCCUCGGUAGUUAACU - 41
• Evidence: experimental ; 454 [1]

Mature mtr-miR2629e-3p

• Accession: MIMAT0054886
• Description: Medicago truncatula mtr-miR2629e-3p mature miRNA
• Sequence: 79 - AGGGACAUUUGAAUAAUUUA - 98
• Evidence: experimental ; unknown

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796