Stem-loop mtr-MIR2587c

Accession

MI0011801

Description

Medicago truncatula mtr-MIR2587c precursor miRNA

Sequence

cgauggugucauggucauugUUGACCGUUCAUAUGAACCCUGcaauugcaaugcauuuuaacuugugugggguucauauaacggucaauagagacccuugacauaaaaga
.....((((((.((((.((((((((((((.((((((((((((((..(((...)))..........)))))))))))))))))))))))))).))))..))))))......

Structure

-cgaug      -u    a            C              --------au   a 
      guguca  gguc uugUUGACCGUU AUAUGAACCCUGca          ugc  
      ||||||  |||| |||||||||||| ||||||||||||||          ||| a
      uacagu  ccag gauaacuggcaa uauacuuggggugu          acg  
agaaaa      uc    a            -              guucaauuuu   u 

Annotation confidence Not enough data

Genome context

chr7: 26671125-26671234 [+]

Mature mtr-miR2587c

• Accession: MIMAT0013254
• Description: Medicago truncatula mtr-miR2587c mature miRNA
• Sequence: 21 - UUGACCGUUCAUAUGAACCCUG - 42
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796