Stem-loop mtr-MIR2656a

Accession

MI0012002

Description

Medicago truncatula mtr-MIR2656a precursor miRNA

Sequence

acaugcauauaagaggucuAAGUUGCAUAAUCGAGUUGGagucacauuugucgagucaaggauguuuaaguugauaaguugugaaguuguaauuguuuauacaaacuaugauugaagugcuaaauga
....((((......((((..(((((.((((.(((....((.(((((((((((((.(.(((....))).).)))))))).)))))..))....))).)))).).))))..))))...)))).......

Structure

---acau    auaaga    uA    - C    U   GUUG  -g     -        g c   g 
       gcau      gguc  AGUU G AUAA CGA    Ga  ucaca uuugucga u aag a
       ||||      ||||  |||| | |||| |||    ||  ||||| |||||||| | |||  
       cgug      uuag  ucaa c uauu guu    uu  agugu gaauaguu a uuu u
aguaaau    ---aag    ua    a a    u   aaug  ga     u        g a   g 

Annotation confidence Not enough data

Genome context

chr1: 10247160-10247286 [+]

Mature mtr-miR2656a

• Accession: MIMAT0013455
• Description: Medicago truncatula mtr-miR2656a mature miRNA
• Sequence: 20 - AAGUUGCAUAAUCGAGUUGG - 39
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796