Accession
MI0012000
Description
Medicago truncatula
mtr-MIR2655n precursor miRNA
Sequence
13416
reads,
130.0
reads per million, 111 experiments
cccauaaguaaugaacugucCGUUUAGGUCCCUUAACUUUAuuuaaaguaucgguuugauccuuucuguuaauuuaauucaaaaaaacguuaacuuuagggaccaaacuaauacuaauuaaauaagauaagggaccaaaauuuaacauuuuuuugaauuaaauuaacagaaaggaccaaacugauacuuucAAUAAAGUUAAGGGACCUAAACGcaccuuuuauuacuuaugaga
..(((((((((((((..((.(((((((((((((((((((((((.((((((((((((((.((((((((((((((((((((((((((((.(((((.(((.((..((..........................))..)).))).))))).)))))))))))))))))))))))))))).)))))))))))))).))))))))))))))))))))))).))..)))))))))))))...
..(((((((((((((..((.(((((((((((((((((((((((.((((((((((((((.((((((((((((((((((((((((((((.(((((.(((.((..((..........................))..)).))).))))).)))))))))))))))))))))))))))).)))))))))))))).))))))))))))))))))))))).))..)))))))))))))...
Structure
-cc cu c u a c c a ga aaacuaauacua cauaaguaaugaa gu CGUUUAGGUCCCUUAACUUUAuu aaaguaucgguuug uccuuucuguuaauuuaauucaaaaaaa guuaa uuu gg cc a ||||||||||||| || ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||| ||| || || guauucauuauuu ca GCAAAUCCAGGGAAUUGAAAUAA uuucauagucaaac aggaaagacaauuaaauuaaguuuuuuu caauu aaa cc gg u aga uc c c c a u a ag aauagaauaaau
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
chr7: 677525-677759 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mtr-MIR2655n
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mtr-miR2655n-5p
| Accession | MIMAT0013453 |
| Description | Medicago truncatula mtr-miR2655n-5p mature miRNA |
| Sequence | 21 - CGUUUAGGUCCCUUAACUUUA - 41 |
| Evidence |
experimental
454 [1] |
Mature mtr-miR2655n-3p
| Accession | MIMAT0054965 |
| Description | Medicago truncatula mtr-miR2655n-3p mature miRNA |
| Sequence | 192 - AAUAAAGUUAAGGGACCUAAACG - 214 |
| Evidence |
experimental
unknown |
References
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