Accession
MI0011865
Description
Medicago truncatula
mtr-MIR2610a precursor miRNA
Literature search
1 open access papers mention mtr-MIR2610a
(1 sentences)
(1 sentences)
Sequence
17125
reads,
145.0
reads per million, 111 experiments
aagAUUGAGACUUGUAUGGCUUCGuugaaggaugcccggagaguaauucaggaaggcaaaaccgaaggcuggggucagcuaguggaguugccagaaaacaagcguaaggagggaauugguuuccuuaacaguaagccugggauguucgacccuaccagagguucuuuccacagugcugguuucauucaugauucaccagagaccaaugcaauuuuagaugaugcaccuggaggagugacaccggucuuugugacgccuggaggagcuugcugcaacuggauugcuguugacauuccuucugugacacccugcucuaaguaauguguuugucuugucuuuuguuguuuuuuguuuuuaagaaaacuccuuucguucugcccaaggcgaaagugAAAUCAUGUAGGGCUUUGUu
..(((.(((.(((((((((.((((..((((((......((.((((((((((...(((((..(((..(((((....)))))..)))..)))))............((((((((.......)))))))).(((((((((((((........)))..((((..((......(((((.((((((.((((((........((((.(.....((((.((......)))))))))))..)))))).))))))..)))))))..)))).)).))))))))...)))))))))).)).....))))))...(((((..((((...))))..)))))................(((((((.......)))))))..(((((((.((.....))))))))))))).))))))))).))).)))
..(((.(((.(((((((((.((((..((((((......((.((((((((((...(((((..(((..(((((....)))))..)))..)))))............((((((((.......)))))))).(((((((((((((........)))..((((..((......(((((.((((((.((((((........((((.(.....((((.((......)))))))))))..)))))).))))))..)))))))..)))).)).))))))))...)))))))))).)).....))))))...(((((..((((...))))..)))))................(((((((.......)))))))..(((((((.((.....))))))))))))).))))))))).))).)))
Structure
aa U A C -----------------------------------------------------------------------------------------uu ugcccg g gaaggcaaaaccgaaggcuggggucagcuaguggaguugccagaaaacaagcguaaggagggaauugguuuccuuaa - gggauguucgacccua ag ucuuuc -u u augauuca a accaa a uu gAU GAG CUUGUAUGG UUCG gaagga ga aguaauucag caguaagc cu ccag gu cacag gcuggu ucauuc ccag g ugca uu a ||| ||| ||||||||| |||| |||||| || |||||||||| |||||||| || |||| || ||||| |||||| |||||| |||| | |||| || uUG UUC GGAUGUACU AAgu cuuccu uu ucguuagguc gucguucg gg gguc ca guguu uggcca agugag gguc c acgu ag g -- U G A gaaagcggaacccgucuugcuuuccucaaaagaauuuuuguuuuuuguuguuuucuguucuguuuguguaaugaaucucgucccacagugu -uacag g --------------------------------------------------------------------------aac a ---------------a cg ------ uc c ------ga - ----- - ua
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
chr6: 10558277-10558688 [-]
Database links
Mature mtr-miR2610a-5p
| Accession | MIMAT0013318 |
| Description | Medicago truncatula mtr-miR2610a-5p mature miRNA |
| Sequence | 4 - AUUGAGACUUGUAUGGCUUCG - 24 |
| Evidence |
experimental
454 [1] |
Mature mtr-miR2610a-3p
| Accession | MIMAT0054849 |
| Description | Medicago truncatula mtr-miR2610a-3p mature miRNA |
| Sequence | 393 - AAAUCAUGUAGGGCUUUGU - 411 |
| Evidence |
experimental
unknown |
References
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