Stem-loop mtr-MIR2644

Accession

MI0011959

Description

Medicago truncatula mtr-MIR2644 precursor miRNA

Sequence

ucgugucguugaccaaguggauacaccuuugaucugaagugucaaugcuacauagguuacuagcagcagcgaaggguauuuagguuauugaaauaucaucaaaaauaaacuuugucaacaaaacaccaaagucucuuaagaguuucacauuagaaugauacauuaagauuauguagcaccaaCACUUCAGAUUGAUGGUGUGUcugguauccgacacgu
.(((((((...((((....((((((((.((((((((((((((...((((((((((.......((....))((..(((((((.........))))))).))........((((((............)))))).((((((..((.(((........))).)).))))))))))))))))...)))))))))))))).))))))))))))...))))))).

Structure

u       uug    agug        u              caa          guuacuagcagcagcgaaggguauuuagguuauugaaauaucaucaaaaauaaacuuugucaacaaaacaccaaaguc      ga  u   cau 
 cgugucg   acca    gauacacc uugaucugaagugu   ugcuacauag                                                                              ucuuaa  gu uca   u
 |||||||   ||||    |||||||| ||||||||||||||   ||||||||||                                                                              ||||||  || |||    
 gcacagc   uggu    cUGUGUGG AGUUAGACUUCACa   acgauguauu                                                                              agaauu  ca agu   a
u       cua    ----        U              acc          ------------------------------------------------------------------------------      -a  u   aag 

Annotation confidence Not enough data

Genome context

chr4: 17526726-17526944 [+]

Mature mtr-miR2644

• Accession: MIMAT0013412
• Description: Medicago truncatula mtr-miR2644 mature miRNA
• Sequence: 183 - CACUUCAGAUUGAUGGUGUGU - 203
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796