Stem-loop mtr-MIR2676f

Accession

MI0012050

Description

Medicago truncatula mtr-MIR2676f precursor miRNA

Sequence

uuuuuuauuacuucauccaaacaauaacauuuaagaaugaaaacaauugaauugaaucauuugaauucccuauaauucuaaauucuucaaaauuucucaauuaccucauccaaacacacucuaggaaaauguuuugagggaauucaaauauuuuggggugaauucCAUUGUUUGGAUAAUAAUUUGaag
..........(((((((((((((((...(((((.((((((...((((...))))..))))))(((((......)))))......(((((((((.....(((..(((((...(((((...((...))...))))))))))..))).....))))))))))))))...))))))))))........)))))

Structure

uuuuuuauua     --------          aac     agaaugaaaacaauugaauugaaucauuugaauucccuauaauucuaaauu         uucuc   ua     ucc     cac  u 
          cuuca        uccaaacaau   auuua                                                   cuucaaaau     aau  ccuca   aaaca   uc  
          |||||        ||||||||||   |||||                                                   |||||||||     |||  |||||   |||||   || a
          gaaGU        AGGUUUGUUA   uaagu                                                   gggguuuua     uua  ggagu   uuugu   ag  
----------     UUAAUAAU          Ccu     ---------------------------------------------------         uaaac   ag     ---     aaa  g 

Annotation confidence Not enough data

Genome context

chr7: 31692186-31692374 [+]

Mature mtr-miR2676f

• Accession: MIMAT0013503
• Description: Medicago truncatula mtr-miR2676f mature miRNA
• Sequence: 166 - CAUUGUUUGGAUAAUAAUUUG - 186
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796