Stem-loop mtr-MIR2651

Accession

MI0011970

Description

Medicago truncatula mtr-MIR2651 precursor miRNA

Sequence

auuggggugcaauauaauuuaaugcaggcauacuagucaaauuauuugguuuaauuuccccuuuugagguuuuuuucuuuuguacauuuggaaauugaaucaaauaaUUUGAUUGGUAUGCCUGCAUUaaauuguauugugccccaa
.((((((((((((((((((((((((((((((((((((((((((((((((((((((((((......((((......))))..........))))))))))))))))))))))))))))))))))))))))))))))))))))))))))

Structure

a                                                          ----ccuuuu    uu 
 uuggggugcaauauaauuuaaugcaggcauacuagucaaauuauuugguuuaauuucc          gagg  u
 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||   
 aaccccguguuauguuaaaUUACGUCCGUAUGGUUAGUUUaauaaacuaaguuaaagg          uucu  u
-                                                          uuuacauguu    uu 

Annotation confidence Not enough data

Genome context

chr2: 31685421-31685567 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mtr-MIR2651

Mature mtr-miR2651

• Accession: MIMAT0013423
• Description: Medicago truncatula mtr-miR2651 mature miRNA
• Sequence: 108 - UUUGAUUGGUAUGCCUGCAUU - 128
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796