Dead hairpin entry

Stem-loop mtr-MIR2630i

Accession

MI0011928

Description

Medicago truncatula mtr-MIR2630i precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

2 open access papers mention mtr-MIR2630i
(2 sentences)

Sequence

21396 reads, 184.0 reads per million, 111 experiments

cccugcaaauauagaauauuUGGUUUUGGUCCUUGGUAUUUuguuuuaauccuuguaaaaucauuucauauugaaauugguccauauaauauucauuuuaguccucauauugagggucuaaaaucaaauauucuacauacuacaagaacaaaauccaauaugaaucaAUUUUACAAGGACUAAAAcaaaauaccaaggaccaaaaccaaauuuuuaauauuugcagga
.(((((((((((.(((.(((((((((((((((((((((((((((((((.((((((((((((...(((((((((....((((...((.((((((.(((((((((((((...)))))).)))))))..)))))).))...))))...((......)))))))))))...)))))))))))).))))))))))))))))))))))))))))))).))).))))))))))).

Structure

c           a   u                               a            cau         ---------aaau    cca  u      -c       -      u 
 ccugcaaauau gaa auuUGGUUUUGGUCCUUGGUAUUUuguuuua uccuuguaaaau   uucauauug             uggu   ua aauauu  auuuuag uccuca  
 ||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||   |||||||||             ||||   || ||||||  ||||||| |||||| a
 ggacguuuaua uuu uaaaccaaaaccaggaaccauaaaacAAAAU AGGAACAUUUUA   aaguauaac             auca   au uuauaa  uaaaauc gggagu  
a           a   u                               C            acu         cuaaaacaagaac    uac  c      ac       u      u