Stem-loop mtr-MIR2676b

Accession

MI0012046

Description

Medicago truncatula mtr-MIR2676b precursor miRNA

Sequence

ccauuguuuggauaauaauuugaagaauuuucaaaaugauggaaauuuaugaaguauuuuguucaaguuaaaauuagagaauuucaaaugacaccuaaaaguguguuuggaugaaugaauguuuugagggaauucaaauacuuuaagaugaauucCAUUGUUUGGAUAAUAAUUUGaagaauuuucaaaaugaug
.((((((((.((.(((..((((((..(((.((.(((((((((((.((((((((((((((.((((...(((((((........(((((((.((((......))))))))))).........)))))))..))))..)))))))))...)))))))))))))))).)).)))..))))))..))).)).))))))))

Structure

c        g  u   aa      ga   u  a           a     ---         -u    aag       -uagagaau       g    cu 
 cauuguuu ga aau  uuugaa  auu uc aaaugauggaa uuuau   gaaguauuu  guuc   uuaaaau         uucaaau acac  a
 |||||||| || |||  ||||||  ||| || ||||||||||| |||||   |||||||||  ||||   |||||||         ||||||| ||||   
 guaguaaa cu uua  aaGUUU  UAA AG UUUGUUACcuu aagua   uuucauaaa  uaag   aguuuug         agguuug ugug  a
-        a  u   ag      AA   U  G           -     gaa         cu    -gg       uaaguaagu       -    aa 

Annotation confidence Not enough data

Genome context

Unknown

Mature mtr-miR2676b

• Accession: MIMAT0013499
• Description: Medicago truncatula mtr-miR2676b mature miRNA
• Sequence: 156 - CAUUGUUUGGAUAAUAAUUUG - 176
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796