miRBase entry: mtr-MIR2607

Stem-loop mtr-MIR2607


Accession
MI0011860
Description
Medicago truncatula mtr-MIR2607 precursor miRNA


Sequence

1953 reads, 14.0 reads per million, 111 experiments
cacaugcauauaaggagucuaagagcauugucacauugucaugauUAAGAUGCCUUGUUGAUAAUGAUUgaauAUGUGAUUAUGUGAUAAGUGUuuauugauuauguuauguu
.......((((((.(((((...((((((((((((((.(((((((((((.(.....).)))))............)))))).))))))).)))))))...)))).).)))))).

Structure
cacaugc      g -    uaa       -       u      ------------     G U 
       auauaa g aguc   gagcauu gucacau gucaug            auUAA A G
       |||||| | ||||   ||||||| ||||||| ||||||            ||||| | C
       uguauu u uuag   uuUGUGA UAGUGUA UAGUGU            UAGUU U C
------u      g a    uua       A       U      AuaagUUAGUAA     G U 


Annotation confidence Low
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Genome context
chr6: 3391869-3391981 [+]

Database links

Mature mtr-miR2607-5p

Accession MIMAT0054845
Description Medicago truncatula mtr-miR2607-5p mature miRNA
Sequence 46 - UAAGAUGCCUUGUUGAUAAUGAUU - 69
Evidence experimental
unknown

Mature mtr-miR2607-3p

Accession MIMAT0013313
Description Medicago truncatula mtr-miR2607-3p mature miRNA
Sequence 74 - AUGUGAUUAUGUGAUAAGUGU - 94
Evidence experimental
454 [1]

References

  1. PubMed ID: 19767456
    Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
    "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
    "Plant Cell (2009) 21:2780-2796