Stem-loop mtr-MIR2607

Accession

MI0011860

Description

Medicago truncatula mtr-MIR2607 precursor miRNA

Sequence

cacaugcauauaaggagucuaagagcauugucacauugucaugauuaagaugccuuguugauaaugauugaauAUGUGAUUAUGUGAUAAGUGUuuauugauuauguuauguu
.......((((((.(((((...((((((((((((((.(((((((((((.(.....).)))))............)))))).))))))).)))))))...)))).).)))))).

Structure

cacaugc      g -    uaa       -       u      ------------     g u 
       auauaa g aguc   gagcauu gucacau gucaug            auuaa a g
       |||||| | ||||   ||||||| ||||||| ||||||            ||||| | c
       uguauu u uuag   uuUGUGA UAGUGUA UAGUGU            uaguu u c
------u      g a    uua       A       U      Auaaguuaguaa     g u 

Annotation confidence Not enough data

Genome context

chr6: 3391869-3391981 [+]

Mature mtr-miR2607

• Accession: MIMAT0013313
• Description: Medicago truncatula mtr-miR2607 mature miRNA
• Sequence: 74 - AUGUGAUUAUGUGAUAAGUGU - 94
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796