miRBase entry: mtr-MIR2630m

Dead hairpin entry

Stem-loop mtr-MIR2630m


Accession
MI0011932
Description
Medicago truncatula mtr-MIR2630m precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search
2 open access papers mention mtr-MIR2630m
(2 sentences)

Sequence

29002 reads, 250.0 reads per million, 111 experiments
uccugcaaauauagaauauuUGGUUUUGGUCCUUGGUAUUUuguuuuaauccuuguaaaaucauuucauauuaaaauuggucccuauaauauucauuuuaguccucauuuugagggacuaaaaucaaauauucgacauauuacaaggaccaaauccaauaugaaucaAUUUUACAAGGACUAAAAcaaaauaccaaggaccaaaaccaaauauucuauauuugcaaggac
((((((((((((((((((((((((((((((((((((((((((((((((.((((((((((((...((((((((....(((((((...(((((((((((((((((((((...))).)))))))))).........)).))))))...)))))))....))))))))...)))))))))))).)))))))))))))))))))))))))))))))))))))))))))).)))).

Structure
-    -                                            a            cau        aaaa       cua      -  ---------          -   u 
 uccu gcaaauauagaauauuUGGUUUUGGUCCUUGGUAUUUuguuuua uccuuguaaaau   uucauauu    uuggucc   uaauau uc         auuuuagucc uca  
 |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||    |||||||   |||||| ||         |||||||||| ||| u
 agga cguuuauaucuuauaaaccaaaaccaggaaccauaaaacAAAAU AGGAACAUUUUA   aaguauaa    aaccagg   auuaua ag         uaaaaucagg agu  
c    a                                            C            acu        ccua       aac      c  cuuauaaac          g   u