Stem-loop mtr-MIR2629a

Accession

MI0011910

Description

Medicago truncatula mtr-MIR2629a precursor miRNA

Sequence

31574 reads, 284.0 reads per million, 111 experiments

caguUUUCCUCGGUAGUUAACUGCAGCUgguuccauaauucgGCAGUUAACUGCCGAGG
.......(((((((((((((((((..................)))))))))))))))))

Structure

caguUUU                 AGCUgguu 
       CCUCGGUAGUUAACUGC        c
       |||||||||||||||||         
       GGAGCCGUCAAUUGACG        c
-------                 gcuuaaua 

Annotation confidence Low

Genome context

chr8: 28139350-28139408 [+]

Mature mtr-miR2629a-5p

• Accession: MIMAT0013363
• Description: Medicago truncatula mtr-miR2629a-5p mature miRNA
• Sequence: 5 - UUUCCUCGGUAGUUAACUGCAGCU - 28
• Evidence: experimental ; 454 [1]

Mature mtr-miR2629a-3p

• Accession: MIMAT0060813
• Description: Medicago truncatula mtr-miR2629a-3p mature miRNA
• Sequence: 43 - GCAGUUAACUGCCGAGG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796