Stem-loop mtr-MIR2660

Accession

MI0012013

Description

Medicago truncatula mtr-MIR2660 precursor miRNA

Sequence

1829 reads, 19.0 reads per million, 105 experiments

agUAAGACAUCAGCUAUAAGCUAguuuuucagcuuucagcuagcUUAUAGCUUAUUUUUACC
.((((((.((.(((((((((((((((...........))))))))))))))).)))))))).

Structure

a      C  C               uuuc 
 gUAAGA AU AGCUAUAAGCUAguu    a
 |||||| || |||||||||||||||    g
 CAUUUU UA UCGAUAUUcgaucga    c
C      -  U               cuuu 

Annotation confidence Medium

Genome context

chr4: 9445467-9445528 [-]

Mature mtr-miR2660-5p

• Accession: MIMAT0013466
• Description: Medicago truncatula mtr-miR2660-5p mature miRNA
• Sequence: 3 - UAAGACAUCAGCUAUAAGCUA - 23
• Evidence: experimental ; 454 [1]

Mature mtr-miR2660-3p

• Accession: MIMAT0054976
• Description: Medicago truncatula mtr-miR2660-3p mature miRNA
• Sequence: 45 - UUAUAGCUUAUUUUUACC - 62
• Evidence: experimental ; unknown

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796