Accession
MI0012019
Description
Medicago truncatula
mtr-MIR2665 precursor miRNA
Sequence
1641
reads,
16.0
reads per million, 111 experiments
uaugaagaggagUGAUUUCAGGUCAAGAAUUGAuccaauaccaccccucaaugaagaaaauggaagagaaaacuagggucgguuuguuGGAAAGGGAUAUAUAGGAUUGUCAu
...........(((((.((..........((..((((((((((((((((................))).......)))).)))..))))))..)).........))..)))))
...........(((((.((..........((..((((((((((((((((................))).......)))).)))..))))))..)).........))..)))))
Structure
uaugaagagga -U AGGUCAAGAA GA -- - ------- aaugaag
gUGAU UC UU uccaau acc accc cuc a
||||| || || |||||| ||| |||| |||
uACUG AG GG AGGuug ugg uggg gag a
----------- UU -GAUAUAUAG AA uu c aucaaaa aagguaa
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
chr5: 16554970-16555082 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from mtr-MIR2665
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mtr-miR2665-5p
| Accession | MIMAT0013472 |
| Description | Medicago truncatula mtr-miR2665-5p mature miRNA |
| Sequence | 13 - UGAUUUCAGGUCAAGAAUUGA - 33 |
| Evidence |
experimental
454 [1] |
Mature mtr-miR2665-3p
| Accession | MIMAT0054981 |
| Description | Medicago truncatula mtr-miR2665-3p mature miRNA |
| Sequence | 89 - GGAAAGGGAUAUAUAGGAUUGUCA - 112 |
| Evidence |
experimental
unknown |
References
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