Stem-loop mtr-MIR2637

Accession

MI0011950

Description

Medicago truncatula mtr-MIR2637 precursor miRNA

Sequence

981 reads, 10.0 reads per million, 105 experiments

aauuauuauauucacuuuauAAAUACUUCCUCUGAUCACUGuuauaaacgaaaaacaacuuuuuaaauugauauauuuggucuaugauauaUAGUGAUCGAAGGGAGUAuuuaauauaccaauc
...................((((((((((((.((((((((((((((.((.(((......................))).)).))))))....)))))))).))))))))))))...........

Structure

aauuauuauauucacuuua            C        ----      a  g   aacaacuuuu 
                   uAAAUACUUCCU UGAUCACU    Guuaua ac aaa          u
                   |||||||||||| ||||||||    |||||| || |||           
                   auuuAUGAGGGA GCUAGUGA    uaguau ug uuu          a
--------cuaaccauaua            A        Uaua      c  g   auauaguuaa 

Annotation confidence Medium

Genome context

chr7: 11864066-11864189 [+]

Mature mtr-miR2637-5p

• Accession: MIMAT0013403
• Description: Medicago truncatula mtr-miR2637-5p mature miRNA
• Sequence: 21 - AAAUACUUCCUCUGAUCACUG - 41
• Evidence: experimental ; 454 [1]

Mature mtr-miR2637-3p

• Accession: MIMAT0054924
• Description: Medicago truncatula mtr-miR2637-3p mature miRNA
• Sequence: 92 - UAGUGAUCGAAGGGAGUA - 109
• Evidence: experimental ; unknown

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796