Stem-loop mtr-MIR2664b

Accession

MI0025215

Description

Medicago truncatula mtr-MIR2664b precursor miRNA

Sequence

uuauaaaaaaaaaaaaguuuAAUUGUGGUGGGUUGACAGUCcaaaacaguuuugaacauacaaucaaucaaaacauuuagaaucaccacaucaauuaacgauuuuaauucauauggaccaaacguggcgauucagaauauuuugauugguuguacgugcaaaacuguuuuggaaugucaacucaccaccauuaaacucaaaaauaaaauaccaauuaugau
...............((((((((.((((((((((((((.(((((((((((((((.((.(((((((((((((((.((((.(((((.((((..................................)))).))))).)))).))))))))))))))).)).))))))))))))))).)))))))))))))).))))))))........................

Structure

---------uuauaaaaaaaaaaa        U              G               a  a               c    a     a    aucaauuaacgauuuu 
                        aguuuAAU GUGGUGGGUUGACA UCcaaaacaguuuug ac uacaaucaaucaaaa auuu gaauc ccac                a
                        |||||||| |||||||||||||| ||||||||||||||| || ||||||||||||||| |||| ||||| ||||                 
                        ucaaauua caccacucaacugu agguuuugucaaaac ug auguugguuaguuuu uaag cuuag ggug                a
uaguauuaaccauaaaauaaaaac        c              a               g  c               a    a     c    caaaccagguauacuu 

Annotation confidence Not enough data

Genome context

chr6: 22852049-22852269 [-]

Mature mtr-miR2664b

• Accession: MIMAT0029975
• Description: Medicago truncatula mtr-miR2664b mature miRNA
• Sequence: 21 - AAUUGUGGUGGGUUGACAGUC - 41
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796