Stem-loop mtr-MIR2635

Accession

MI0011948

Description

Medicago truncatula mtr-MIR2635 precursor miRNA

Sequence

aaauauuagauuuaauAUUAUUGUCAACGUGACUAGaauauaaagagucacacacaaagaacggucaaaagagaaauauauaagugugacuuauauagguaugcguuuaguaaauaacacuaauuaguuagcaaaauauuaaacucguuauug
.((((...(((((((((((.((((.(((((.(((...(((((...((((((((...........((....))...........))))))))))))).)))..))))).......((((........))))))))))))))))).))..)))).

Structure

a    uua  -         A    ----------------------C     -G   AGa     aag        acaaagaacgg  a 
 aaua   ga uuuaauAUU UUGU                       AACGU  ACU   auaua   agucacac           uc a
 ||||   || ||||||||| ||||                       |||||  |||   |||||   ||||||||           ||  
 uuau   cu aaauuauaa aacg                       uugcg  ugg   uauau   ucagugug           ag a
g    -ug  c         -    auugauuaaucacaauaaaugau     ua   --a     ---        aauauauaaag  a 

Annotation confidence Not enough data

Genome context

chr5: 4841515-4841667 [+]

Mature mtr-miR2635

• Accession: MIMAT0013401
• Description: Medicago truncatula mtr-miR2635 mature miRNA
• Sequence: 17 - AUUAUUGUCAACGUGACUAG - 36
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796